Updated November 2025
LHDN E-Invoice Malaysia 2025 - Complete Implementation Guide

LHDN E-Invoice Malaysia 2025 - Complete Implementation Guide

LHDN E-Invoice Guide 2025: Deadlines, exemptions, and how to comply. Everything Malaysian SMEs need to know to avoid penalties.

Understanding LHDN E-Invoice Requirements in Malaysia: Complete Guide

Malaysia's Inland Revenue Board (LHDN) mandates e-invoicing for all businesses starting 2025. This comprehensive guide explains e-invoice requirements, implementation timelines, and how to ensure your accounting software complies with regulations.

What is E-Invoice?

E-invoice is a structured digital document issued by suppliers to buyers for transactions. Unlike PDF invoices sent via email, e-invoices follow standardized formats (XML or JSON) and are transmitted through approved channels to LHDN's MyInvois system for validation. The key difference: e-invoices are machine-readable and validated in real-time by LHDN, ensuring accuracy and preventing fraud. Once validated, LHDN issues a unique identification number and QR code, making the invoice legally recognized.

Implementation Timeline

LHDN rolled out e-invoicing in phases: Phase 1 (August 1, 2024): Companies with annual turnover exceeding RM 100 million Phase 2 (January 1, 2025): Companies with annual turnover exceeding RM 25 million

Revised Mandatory Implementation Schedule

The rollout is based on annual turnover or revenue, primarily determined by a taxpayer’s 2022 financial statements:

PhaseAnnual Turnover / Revenue ThresholdImplementation DateRelaxation Period End
Phase 1Exceeding RM100 million1 August 20241 February 2025
Phase 2RM25 million to RM100 million1 January 20251 July 2025
Phase 3RM5 million to RM25 million1 July 20251 January 2026
Phase 4RM1 million to RM5 million1 January 20261 July 2026
Phase 5Up to RM1 million (and above RM500k)1 July 20261 January 2027

Exemption Threshold: Taxpayers with an annual turnover or revenue below RM1,000,000 are currently exempt from e-invoicing requirements.

Note: Some December 2025 reports indicate the Cabinet approved raising this threshold to RM1 million, effectively withdrawing the 1 July 2026 mandate for those between RM500k and RM1m.

Timeline for New Businesses

For businesses commencing operations from 2023 onwards:

  • Commencing 2023–2025: If annual turnover is at least RM1 million, the mandatory date is 1 July 2026.
  • Commencing 2026 onwards: Mandatory as of 1 July 2026 or upon commencement, whichever is later.

Critical 2026 Deadlines & Rules

  • Individual E-Invoices Required: Effective 1 January 2026, consolidated e-invoices are no longer permitted for transactions exceeding RM10,000.
  • Sector-Specific Bans on Consolidation: From 1 January 2026, specific industries including electricity (postpaid) and telecommunication services (postpaid/internet) must issue individual e-invoices for every transaction regardless of amount.

Official Resources

For technical specifications and the latest official updates, refer to the Inland Revenue Board of Malaysia (IRBM) e-Invoice Portal.

Types of E-Invoices

1. Invoice

Standard invoice issued by suppliers to buyers for goods or services. This is the most common e-invoice type covering typical business transactions.

2. Credit Note

Issued to reduce the amount of a previously issued invoice due to returns, discounts, or errors. Credit notes must reference the original invoice.

3. Debit Note

Issued to increase the amount of a previously issued invoice due to additional charges or corrections. Debit notes must reference the original invoice.

4. Refund Note

Issued when refunding payments to customers. Common in retail and e-commerce for returned goods.

5. Self-Billed Invoice

Issued by buyers on behalf of suppliers in specific scenarios (e.g., purchases from individuals, foreign suppliers without Malaysian presence).

E-Invoice Requirements

Mandatory Information

Every e-invoice must include:

  • Supplier information (name, TIN, address, contact)
  • Buyer information (name, TIN/ID, address)
  • Invoice date and time
  • Invoice number (unique sequential)
  • Product/service description
  • Quantity and unit price
  • Total amount before tax
  • Tax amount (SST if applicable)
  • Total amount including tax
  • Payment terms and methods

Optional Information

Additional details that may be included:

  • Delivery information
  • Purchase order reference
  • Project codes
  • Custom fields for industry-specific data

Digital Signature

E-invoices must be digitally signed to ensure authenticity and prevent tampering. LHDN validates the digital signature upon submission.

E-Invoice Submission Process

Step 1: Generate E-Invoice

Create the invoice in your accounting software with all required information. The software formats the data according to LHDN's specifications (XML or JSON).

Step 2: Validate E-Invoice

The software validates the e-invoice against LHDN's rules to catch errors before submission. Validation checks include:

  • Required fields present
  • Correct data formats
  • Valid TIN numbers
  • Logical consistency (e.g., total = subtotal + tax)

Step 3: Submit to MyInvois

The validated e-invoice is transmitted to LHDN's MyInvois system through:

  • API integration (automated submission from accounting software)
  • Peppol network (international e-invoicing standard)
  • MyInvois portal (manual submission for low-volume businesses)

Step 4: Receive Validation Response

LHDN's system validates the e-invoice in real-time (typically within seconds). If valid, LHDN issues:

  • Unique Invoice Reference Number (IRN)
  • QR code for verification
  • Validation timestamp If invalid, LHDN returns error messages indicating what needs correction.

Step 5: Share with Buyer

Once validated, share the e-invoice with the buyer through:

  • Email (PDF with QR code)
  • Buyer's accounting system (if integrated)
  • Peppol network (for Peppol-enabled buyers) The buyer can verify the e-invoice's authenticity by scanning the QR code or checking the IRN on MyInvois portal.

Peppol Network

Peppol (Pan-European Public Procurement On-Line) is an international e-invoicing network adopted by Malaysia. Peppol provides:

Standardized Format

Peppol uses Universal Business Language (UBL) format, ensuring e-invoices are readable across different systems and countries.

Access Points

Peppol-certified access points (like QNE AI Cloud) connect directly to the Peppol network, enabling seamless e-invoice exchange. Businesses using Peppol-certified software enjoy automated submission without manual portal access.

International Compatibility

As more countries adopt Peppol, Malaysian businesses can exchange e-invoices internationally using the same infrastructure—future-proofing your compliance capability.

Choosing E-Invoice-Ready Software

Peppol-Certified Options

QNE AI Cloud (including its Prime version) is a Peppol-certified access point, providing the most automated e-invoice experience. E-invoices are generated, validated, and transmitted automatically through Peppol infrastructure. Advantages:

  • Fully automated submission
  • Real-time validation
  • International compatibility
  • Minimal manual intervention

Direct LHDN Integration

AutoCount, SQL Account, ABSS, Financio, Xero, QuickBooks integrate directly with LHDN's MyInvois system via API.

  • More control over submission process
  • Easier troubleshooting
  • Suitable for businesses preferring direct LHDN connection Disadvantages:
  • Slightly more manual steps than Peppol
  • Limited international compatibility

Evaluation Criteria

When choosing software for e-invoice compliance, consider: Automation level: How many manual steps required? Validation: Does software validate before submission to prevent errors? Error handling: How are rejected e-invoices handled? Training: Does vendor provide e-invoice training? Support: Is e-invoice support included or extra? Limits: Any monthly e-invoice quotas?

Common E-Invoice Challenges

TIN Validation

E-invoices require valid Tax Identification Numbers (TIN) for both supplier and buyer. Ensure your customer database includes accurate TINs. Invalid TINs cause e-invoice rejection. Solution: Verify customer TINs before issuing e-invoices. LHDN provides TIN verification services.

Timing Issues

E-invoices must be issued within specific timeframes:

  • Within 7 days of transaction for most businesses
  • Within 1 month for specific industries (e.g., construction) Late submission may cause compliance issues. Solution: Automate e-invoice generation immediately upon transaction completion.

Credit/Debit Notes

Credit and debit notes must reference original invoice numbers. Ensure your software links these documents correctly. Solution: Use software that automatically references original invoices when creating credit/debit notes.

Self-Billed Invoices

Purchases from individuals or foreign suppliers without Malaysian presence require self-billed invoices issued by the buyer. Solution: Ensure your software supports self-billed invoice creation with proper documentation.

System Downtime

LHDN's MyInvois system may experience downtime during maintenance or high traffic. Solution: Submit e-invoices during off-peak hours. Use software that queues failed submissions for automatic retry.

Best Practices

1. Start Early

Don't wait until the mandatory deadline. Implement e-invoicing early to:

  • Identify and resolve issues before deadlines
  • Train staff gradually
  • Build confidence with the system

2. Clean Customer Data

Ensure your customer database includes:

  • Accurate company names
  • Valid TINs
  • Complete addresses
  • Correct contact information Incomplete or inaccurate data causes e-invoice rejections.

3. Train Your Team

Provide comprehensive training on:

  • E-invoice requirements
  • Software features for e-invoicing
  • Error handling procedures
  • Compliance deadlines Most vendors offer free e-invoice training—take advantage of these resources.

4. Test Thoroughly

Before going live:

  • Create test e-invoices
  • Submit to LHDN's sandbox environment (if available)
  • Verify QR codes and IRNs
  • Test error scenarios

5. Monitor Compliance

Regularly review:

  • E-invoice submission rates
  • Rejection rates and reasons
  • Compliance with timing requirements
  • Customer feedback on e-invoice receipt

6. Keep Documentation

Maintain records of:

  • All e-invoices issued
  • LHDN validation responses
  • Error logs and resolutions
  • Training records Proper documentation helps during audits and troubleshooting.

Penalties for Non-Compliance

LHDN may impose penalties for e-invoice non-compliance:

  • Rejected tax deductions: Expenses without valid e-invoices may be disallowed
  • Audit triggers: Non-compliance increases audit likelihood
  • Penalties: Fines for persistent non-compliance
  • Business disruption: Inability to issue valid invoices affects operations The exact penalty structure is still being finalized, but compliance is clearly mandatory.

Getting Help

LHDN Resources

Software Vendor Support

All accounting software vendors provide e-invoice support:

  • Free webinars and training
  • Documentation and guides
  • Technical support for implementation
  • Compliance updates

Professional Advisors

Consider engaging:

  • Accountants: For compliance advice
  • Tax consultants: For complex scenarios
  • Software consultants: For implementation assistance

Future Developments

E-invoicing is evolving. Expect:

  • Expanded requirements: More transaction types may require e-invoices
  • International adoption: More countries joining Peppol network
  • Enhanced features: Real-time reporting, automated reconciliation
  • Integration: E-invoicing connecting with other government systems Choosing software with strong e-invoice capabilities future-proofs your business for these developments.

Last Updated: November 2025

DC

David Cheah

Senior Financial Systems Analyst

David is a chartered accountant (MIA) with over 15 years of experience in Malaysian SME financial systems. He specializes in digital transformation, e-Invoice compliance, and cloud accounting migration. His independent reviews help businesses navigate the complex landscape of accounting software in Malaysia.

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